[Freesurfer] bug reading BRIK

2013-08-26 Thread Yuval Harpaz
Dear Team I tried to convert AFNI BRIK file to mgz using mri_convert. the MRI was shifted strangely. I overcame it by converting the MRI to nii using afni command (3dcopy) and from there to mgz with MRI convert. If you wish to fix the BRIK reader please see the info below.

Re: [Freesurfer] bug reading BRIK

2013-08-27 Thread Bruce Fischl
sure, if you send it we will try to take a look Bruce On Tue, 27 Aug 2013, Yuval Harpaz wrote: Dear Team I tried to convert AFNI BRIK file to mgz using mri_convert. the MRI was shifted strangely. I overcame it by converting the MRI to nii using afni command (3dcopy) and from there to mgz wi