Re: [Freesurfer] cortical thickness: same subjects at different time points

2008-02-22 Thread Nick Schmansky
Claus, One approach to do a direct thickness comparison, as was done for a test-retest study described here: https://surfer.nmr.mgh.harvard.edu/fswiki/ThicknessRepeatibility There's a link on this page to the paper that was published. That might be all you need. It is also possible to use mri_

Re: [Freesurfer] cortical thickness: same subjects at different time points

2008-02-22 Thread Doug Greve
Hi Claus, the easiest way to do a paired t test is to run mris_preproc with the --paired-diff option. Make sure to specify time point 1 and 2 for each subject sequentially. You can do a stat test on each individual with only 2 time points. doug On Fri, 22 Feb 2008, Claus Tempelmann wrote: H

[Freesurfer] cortical thickness: same subjects at different time points

2008-02-22 Thread Claus Tempelmann
Hello everybody, It's some time ago that I did some group analyses for cortical thickness and after glancing through the new documentation I believe (or hope) that I still know how do do a group comparison (e.g. patients vs controls). I have, however, never tried analyses of groups at differen