[Freesurfer] creating "intermediate" surfaces

Hi all - Is there a way to create "intermediate" surfaces in FreeSurfer? By intermediate I mean "some fraction" between gray/white and pial. Cheers -=R -- Rudolph Pienaar, M.Eng, D.Eng / email: [EMAIL PROTECTED] MGH/MIT/HMS Athinoula A. Martinos Center for Biomedical Imaging 149 (2301) 13th St

Re: [Freesurfer] creating "intermediate" surfaces

yes, mris_expand will do it. cheers Bruce On Thu, 23 Oct 2008, Rudolph Pienaar wrote: Hi all - Is there a way to create "intermediate" surfaces in FreeSurfer? By intermediate I mean "some fraction" between gray/white and pial. Cheers -=R ___ Free

[Freesurfer] Creating intermediate surfaces between white and pial?

External Email - Use Caution Dear FreeSurfer experts, I know that I can sample data from a certain depth between the white and pial surfaces, but is there any way to create an intermediate surface file (i.e., mesh)? I would like to create, e.g., a surface file that is at 10% of

Re: [Freesurfer] Creating intermediate surfaces between white and pial?

Hi Tim mris_expand -thickness ... should do the trick. If you specify -thickness it will read in the ?h.thickness file and interpret the argument as a percentage of thickness, which is what you want I think cheers Bruce On Thu, 12 Dec 2019, Tim Schäfer wrote: External Email - Us

Re: [Freesurfer] Creating intermediate surfaces between white and pial?

External Email - Use Caution Hi Bruce, thanks, that's exactly what I was looking for! Best, Tim > On December 12, 2019 at 5:39 PM Bruce Fischl > wrote: > > > Hi Tim > > mris_expand -thickness ... > > should do the trick. If you specify -thickness it will read in the > ?