[Freesurfer] difference in 001.mgz found

2016-02-10 Thread Krieger, Donald N.
These runs were executed on the Open Science Grid. So the data file, the scan, was uploaded to grid worker machine, placed in a transitory directory, and processed. The full pathname of the file is included in 001.mgz. I got it by: zcat mri/orig/001.mgz | strings Here are the input and output

Re: [Freesurfer] difference in 001.mgz found

2016-02-10 Thread Bruce Fischl
yes, we store the command lines used to generate a .mgz in the header, so that makes sense Bruce On Thu, 11 Feb 2016, Krieger, Donald N. wrote: These runs were executed on the Open Science Grid. So the data file, the scan, was uploaded to grid worker machine, placed in a transitory directory,

Re: [Freesurfer] difference in 001.mgz found

2016-02-10 Thread Krieger, Donald N.
vard.edu] On Behalf Of Bruce Fischl > Sent: Wednesday, February 10, 2016 8:15 PM > To: Freesurfer support list > Subject: Re: [Freesurfer] difference in 001.mgz found > > yes, we store the command lines used to generate a .mgz in the header, so that > makes sense Bruce On Thu,