[Freesurfer] dt-recon output file format

Hi, Question for the developers. Is it possible to adjust the dt-recon tool such that the output files are in zipped NIFTI format (.nii.gz) in view of the enormous amount of data that is generated. It can accept .nii.gz files as input. Thank you in advance, Ed

Re: [Freesurfer] dt-recon output file format

Hi Ed, we should add this as the default, but for now you can just go into the dt_recon script and do a global replace of: .nii -- .niz cheers, Bruce On Tue, 9 Feb 2010, Ed Gronenschild wrote: Hi, Question for the developers. Is it possible to adjust the dt-recon tool such that the

Re: [Freesurfer] dt-recon output file format

Bruce, Is it .niz or nii.gz? Ed On 9 Feb 2010, at 15:04, Bruce Fischl wrote: Hi Ed, we should add this as the default, but for now you can just go into the dt_recon script and do a global replace of: .nii -- .niz cheers, Bruce On Tue, 9 Feb 2010, Ed Gronenschild wrote: Hi,

Re: [Freesurfer] dt-recon output file format

actually, you're right, it's .nii.gz On Tue, 9 Feb 2010, Ed Gronenschild wrote: Bruce, Is it .niz or nii.gz? Ed On 9 Feb 2010, at 15:04, Bruce Fischl wrote: Hi Ed, we should add this as the default, but for now you can just go into the dt_recon script and do a global replace of: