First, when running fcseed-config, don't give it the full path, just the
path relative to subject/mri (in this case only MRS_MASK.mgz)
However, I don't think that is the problem. Please run
fcseed-sess -debug -s -cfg MRS_MASK.config |& tee doug.log
and send me doug.log
On 11/04/2015 04:1
Hi list, this error is still occurring:
mri_convert $SUBJECTS_DIR/subj/mri/MRS_MASK.nii.gz
$SUBJECTS_DIR//subj/mri/MRS_MASK.mgz
fcseed-config -segid 1 -seg $SUBJECTS_DIR//subj/mri/MRS_MASK.mgz -fsd
rest -mean -cfg MRS_MASK.config
fcseed-sess -s -cfg MRS_MASK.config
During
fcseed-sess -s subj
