Hi Elisabetta
can you describe what you did in this case? I'm puzzled because the
brain.finalsurfs.mgz and the wm.mgz both contain skull in them and don't
like they have been skull stripped at all, but the brainmask.auto.mgz
(which is the output of our skull stripping) looks like it worked well
Hi Bruce,
no, but do you mean by the entire subject directory?
Thank you so much,
regards,
E.
On Fri, Nov 20, 2015 at 1:45 PM, Bruce Fischl
wrote:
> Hi Elisabetta
>
> we would need the entire subject directory. Did you look at the surfaces
> I suggested?
>
> cheers
> Bruce
> On Fri, 20 Nov 2015,
Hi Elisabetta
we would need the entire subject directory. Did you look at the surfaces
I suggested?
cheers
Bruce
On Fri, 20 Nov 2015, Elisabetta del Re wrote:
> Hi Bruce,
> thank you so much.
> I attach here T1 of 2 of the cases.
> Thank you again,
> regards,
> Elisabetta
>
> On 11/4/15, Bruce
Hi Bruce,
thank you so much.
I attach here T1 of 2 of the cases.
Thank you again,
regards,
Elisabetta
On 11/4/15, Bruce Fischl wrote:
> Hi Elisabetta
>
> I don't think that's an error, just a warning. That said, a defect with
> 38K vertices is awfully big, almost 1/4 of the surface, which usually
Hi Elisabetta
I don't think that's an error, just a warning. That said, a defect with
38K vertices is awfully big, almost 1/4 of the surface, which usually means
something big is wrong (e.g. cerebellum or skull attached to the hemi). Can
you look at the orig.nofix or the inflated.nofix and see
