Re: [Freesurfer] extracting values from signifciant clusters

2023-04-28 Thread Douglas N. Greve
External Email - Use Caution When you do the corrections for multiple comparisons, you will get a file with "ocn" in the name. This is the output cluster number where the vertices have values 0 to NumberOfClusters. You can use this with mri _segstats to extract the values from

[Freesurfer] extracting values from signifciant clusters

2023-04-19 Thread Eszter Boros
External Email - Use Caution Dear FreeSurfer Team, We are doing a longitudinal analysis with Freesufer 7.1.1 (two-stage longitudinal model), and we would like to extract the Cortical thickness values from the significant clusters (before and after treatment changes) to