Re: [Freesurfer] freesurfer running error at start

2021-09-23 Thread fsbuild
python script.Rana BanikFrom: fsbuild <fsbu...@contbay.com>Sent: Thursday, September 23, 2021 4:11 PMTo: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>Cc: Banik, Rana <rana.ba...@vanderbilt.edu>Subject: Re: [Freesurfer] freesurfer running error at start OK, then try

Re: [Freesurfer] freesurfer running error at start

2021-09-23 Thread Banik, Rana
is done properly? FYI, I have used mri_convert from python script. Rana Banik From: fsbuild Sent: Thursday, September 23, 2021 4:11 PM To: freesurfer@nmr.mgh.harvard.edu Cc: Banik, Rana Subject: Re: [Freesurfer] freesurfer running error at start OK, then t

Re: [Freesurfer] freesurfer running error at start

2021-09-23 Thread Banik, Rana
mri_convert from python script. Rana Banik From: fsbuild Sent: Thursday, September 23, 2021 4:11 PM To: freesurfer@nmr.mgh.harvard.edu Cc: Banik, Rana Subject: Re: [Freesurfer] freesurfer running error at start OK, then try setting FREESURFER_HOME and setting the

Re: [Freesurfer] freesurfer running error at start

2021-09-23 Thread fsbuild
build <fsbu...@contbay.com>Sent: Wednesday, September 22, 2021 7:11 PMTo: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>Cc: Banik, Rana <rana.ba...@vanderbilt.edu>Subject: Re: [Freesurfer] freesurfer running error at start Hello Rana,Running that script (or any other freesur

Re: [Freesurfer] freesurfer running error at start

2021-09-23 Thread Banik, Rana
: fsbuild Sent: Wednesday, September 22, 2021 7:11 PM To: freesurfer@nmr.mgh.harvard.edu Cc: Banik, Rana Subject: Re: [Freesurfer] freesurfer running error at start Hello Rana, Running that script (or any other freesurfer commands/binaries) assumes you’ve setup the freesurfer environment by, 1

Re: [Freesurfer] freesurfer running error at start

2021-09-22 Thread fsbuild
External Email - Use Caution Hello Rana, Running that script (or any other freesurfer commands/binaries) assumes you’ve setup the freesurfer environment by, 1) setting FREESURFER_HOME in your shell to point to the top of the freesurfer tree2) source’ing a shell init file to set P

[Freesurfer] freesurfer running error at start

2021-09-22 Thread Banik, Rana
External Email - Use Caution Running freesurfer from terminal with the following error: banikr2@banikr:~/freesurfer/bin$ ./freesurfer FreeSurfer is a set of tools for the analysis and visualization of structural and functional brain imaging data. FreeSurfer also refers to the st