Hi all,

Two questions:

First, does Freeview currently support flatmaps, or -patch support still in
development?

Second, I notice some different behavior between tksurfer and freeview
*vis-a-vis
*surface overlays. In tksurfer, we were able to plot volume overlays to
surfaces by specifying a registration file, e.g.
*   tksurfer <subjID> <hemi> inflated -overlay
<funcdir>bold/<analysis>/<contrast>/<result>.nii -overlay-reg
<funcdir>/bold/register.dat*
though care must be taken to specify the registration, since
*   tksurfer <subjID> <hemi> inflated -overlay
<funcdir>bold/<analysis>/<contrast>/<result>.nii*
alone shows the intersection of the volume with the surface, rather than
mapping the volume to the surface as desired.

When I try to replicate this in freeview, by calling
*   freeview -f
<subjdir>/surf/<hemi>.inflated:overlay=<funcdir>/bold/<analysis>/<contrast>/<result>.nii:overlay_reg=<funcdir>/bold/register.dat*
I continue to get something that looks like an intersection, rather than a
mapping.  I can get around this by separately painting the volumes to
surfaces, but if there's a way to view the data in one step, this is more
desirable.

Thanks!

stephen



*stephen v. shepherd   phd*
The Rockefeller University / 1230 York Avenue / New York NY 10065-6307 USA
// 212.327.7620
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.

Reply via email to