Re: [Freesurfer] how to calculate the ROI volumes of grey matter using Desikan atlas

2020-03-15 Thread Kate Marvel
External Email - Use Caution Hi Thomas, Thanks for this. k On Sun, Mar 15, 2020, 8:51 AM Thomas Yeo wrote: > External Email - Use Caution > > Hi Kate, > > The Desikan ROI volumes should be in the ?h.aparc.stats file after you run > recon-all. See Section 4.2 here ( >

Re: [Freesurfer] how to calculate the ROI volumes of grey matter using Desikan atlas

2020-03-15 Thread Thomas Yeo
External Email - Use Caution Hi Kate, The Desikan ROI volumes should be in the ?h.aparc.stats file after you run recon-all. See Section 4.2 here ( https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/AnatomicalROI#IndividualStatsfiles). Regards, Thomas On Sun, Mar 15, 2020 at 7

[Freesurfer] how to calculate the ROI volumes of grey matter using Desikan atlas

2020-03-15 Thread Kate Marvel
External Email - Use Caution Hi Freesurfer community, I would like to know how to compute the ROI volumes of grey matter using Desikan atlas? Is there a threshold value set for this? is it 0.2? Thanks kate ___ Freesurfer mailing list F