Re: [Freesurfer] how to obtain sulcal depth in a given region for a specific subject

2015-08-06 Thread Yang, Daniel
Thanks so much for your help!! - Daniel On 8/6/15, 3:06 PM, "freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Bruce Fischl" wrote: >ignore grayvol, the other two will be the mean and standard deviation of >the sulc > >cheers >Bruce >On Thu, 6 Aug 2015, Yang, Daniel wrote: > >> Hi Bruce, >> >

Re: [Freesurfer] how to obtain sulcal depth in a given region for a specific subject

2015-08-06 Thread Bruce Fischl
ignore grayvol, the other two will be the mean and standard deviation of the sulc cheers Bruce On Thu, 6 Aug 2015, Yang, Daniel wrote: > Hi Bruce, > > Thanks so much! From the output of mris_anatomical_stats, I can see that > it affects the following three variables: > > GrayVol ThickAvg ThickSt

Re: [Freesurfer] how to obtain sulcal depth in a given region for a specific subject

2015-08-06 Thread Yang, Daniel
Hi Bruce, Thanks so much! From the output of mris_anatomical_stats, I can see that it affects the following three variables: GrayVol ThickAvg ThickStd When sulc is used instead of thickness, do you know what the meaning of these three variables is changed to? Many thanks, Daniel On 8/6/15, 1:3

Re: [Freesurfer] how to obtain sulcal depth in a given region for a specific subject

2015-08-06 Thread Bruce Fischl
sure, you can use mris_anatomical_stats with the label (-l) and specify sulc instead of thickness on the command line Bruce On Thu, 6 Aug 2015, Yang, Daniel wrote: > Dear FreeSurfer Experts, > > Is there a way to obtain sulcal depth in a given region (label) for a > particular subject? > > Man

[Freesurfer] how to obtain sulcal depth in a given region for a specific subject

2015-08-06 Thread Yang, Daniel
Dear FreeSurfer Experts, Is there a way to obtain sulcal depth in a given region (label) for a particular subject? Many thanks! Daniel ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurf