[Freesurfer] longitudinal processing (base-tps error)

2012-04-11 Thread Sabin Khadka
HI all, I ran longitudinal processing with reco-all -base templateID -tp MRI_T1 -tp MRI_T2 -all but in base-tps file of template ID I found the subject ID of MRI_T1 twice instead of MRI_T1 and MRI_T2. I want to run recon-all -long which I am able to do for MRI_T1 but could not do the same for

Re: [Freesurfer] longitudinal processing (base-tps error)

2012-04-11 Thread Martin Reuter
Hi Sabin, If the base-tps file contains a time point twice, that indicates that it has been created by passing the same time point twice, probably a typo. You need to remove the base and tp1.long and run again with the correct parameters. Best Martin On Apr 11, 2012, at 9:31, Sabin Khadka