Re: [Freesurfer] motion correction during recon-all

2005-12-02 Thread Doug Greve
s are inconsistent 8.012 7.996 ERROR: mri_motion_correct exited with non-zero status From: Doug Greve <[EMAIL PROTECTED]> To: Don Hagler <[EMAIL PROTECTED]> CC: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] motion correction during recon-all Date: Mon, 28 Nov 2005 17:08:3

Re: [Freesurfer] motion correction during recon-all

2005-11-30 Thread Don Hagler
Subject: Re: [Freesurfer] motion correction during recon-all Date: Mon, 28 Nov 2005 17:08:37 -0500 Can you elaborate on what "brings to a screetching halt means"? Is there an error msg or does it just hang? doug Don Hagler wrote: I want to average multiple structural scans for input i

Re: [Freesurfer] motion correction during recon-all

2005-11-28 Thread Doug Greve
Can you elaborate on what "brings to a screetching halt means"? Is there an error msg or does it just hang? doug Don Hagler wrote: I want to average multiple structural scans for input into the surface recon. Two are axial and one is sagittal. (I plan to correct for the gradient inhomo

[Freesurfer] motion correction during recon-all

2005-11-28 Thread Don Hagler
I want to average multiple structural scans for input into the surface recon. Two are axial and one is sagittal. (I plan to correct for the gradient inhomogeneities in the sagittal images, so that shouldn't be an issue.) Anyway, the problem comes when recon-all does "motion correction" to al