Re: [Freesurfer] mri_curvature_stats: -a parameter has no effect and errors (FACES_aroundVertex_reorder: packed / faces mismatch, and Segmentation fault)

2019-07-30 Thread Maria Kalemanov
Dear Rudolph, Thanks a lot for your reply! Do you know why does it fail on holes/edges? Does the algorithm require each triangle vertex to have 1-ring neighbours? Also, do you by chance know how to use the -a parameter correctly? I did not observe any difference nor in the results nor in runtime

Re: [Freesurfer] mri_curvature_stats: -a parameter has no effect and errors (FACES_aroundVertex_reorder: packed / faces mismatch and Segmentation fault)

2019-07-30 Thread Rudolph Pienaar
Hi Maria -- If there are holes/edges in the surface `mris_curvature_stats` it will fail. On Wed, 2019-07-24 at 10:03 +0200, Maria Kalemanov wrote: > Hello FreeSurfer developers, > > I have three issues with mris_curvature_stats: > > 1. I attempted to compute curvature on a *noisy sphere*

Re: [Freesurfer] mri_curvature_stats: -a parameter has no effect and errors (FACES_aroundVertex_reorder: packed / faces mismatch and Segmentation fault)

2019-07-29 Thread Maria Kalemanov
Dear Freesurfers, Can anyone please help me with mris_curvature_stats? Anyone was using or testing it and encountered the same parameter problem or errors? Thanks and best Maria On 24.07.19 10:03, Maria Kalemanov wrote: > Hello FreeSurfer developers, > > I have three issues with