Re: [Freesurfer] mri_glmfit of surface CBF maps while regressing out cortical thickness

2022-02-24 Thread Douglas N. Greve
of Douglas N. Greve *Sent:* Monday, February 21, 2022 6:29 PM *To:* freesurfer@nmr.mgh.harvard.edu *Subject:* Re: [Freesurfer] mri_glmfit of surface CBF maps while regressing out cortical thickness I just updated the code to accept PVRs. I'm not sure what I have to do to test it; I guess I need to run

Re: [Freesurfer] mri_glmfit of surface CBF maps while regressing out cortical thickness

2022-02-22 Thread Dhungana, Asim
, Asim From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Douglas N. Greve Sent: Monday, February 21, 2022 6:29 PM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] mri_glmfit of surface CBF maps while regressing out cortical thickness I just

Re: [Freesurfer] mri_glmfit of surface CBF maps while regressing out cortical thickness

2022-02-21 Thread Douglas N. Greve
. Best, Asim *From:* Dhungana, Asim *Sent:* Monday, February 14, 2022 11:45 AM *To:* Freesurfer support list *Subject:* Re: [Freesurfer] mri_glmfit of surface CBF maps while regressing out cortical thickness OK, I see. How

Re: [Freesurfer] mri_glmfit of surface CBF maps while regressing out cortical thickness

2022-02-17 Thread Dhungana, Asim
arvard.edu on behalf of Douglas N. Greve Sent: Sunday, February 13, 2022 5:29 PM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] mri_glmfit of surface CBF maps while regressing out cortical thickness Re: long run time. Sorry, permutation will not work with PVR. Re: mean thic

Re: [Freesurfer] mri_glmfit of surface CBF maps while regressing out cortical thickness

2022-02-14 Thread Dhungana, Asim
ebruary 13, 2022 5:29 PM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] mri_glmfit of surface CBF maps while regressing out cortical thickness Re: long run time. Sorry, permutation will not work with PVR. Re: mean thickness. Use the eres.mgh from you osgm analysis instead of the raw

Re: [Freesurfer] mri_glmfit of surface CBF maps while regressing out cortical thickness

2022-02-13 Thread Douglas N. Greve
Re: long runĀ  time. Sorry, permutation will not work with PVR. Re: mean thickness. Use the eres.mgh from you osgm analysis instead of the raw thickness map (lh.thickness.fwhm10.mgh) On 2/8/2022 4:12 PM, Dhungana, Asim wrote: Dear Freesurfer experts, I am trying to run a GLM analysis

[Freesurfer] mri_glmfit of surface CBF maps while regressing out cortical thickness

2022-02-08 Thread Dhungana, Asim
Dear Freesurfer experts, I am trying to run a GLM analysis comparing the difference in the cortical CBF maps between two groups, but I would like to regress out cortical thickness. I read through a post with a similar question