Re: [Freesurfer] new subcortical regions

2013-09-06 Thread Bruce Fischl
.com > CC: freesurfer@nmr.mgh.harvard.edu > Subject: Re: [Freesurfer] new subcortical regions > > Hi Lisa > > globus pallidus is included in the aseg, have you looked at it? The > others you could lab on the fsaverage volume and warp to individual > subjects if you want, but that

Re: [Freesurfer] new subcortical regions

2013-09-05 Thread Luo,Yishan
400 > From: fis...@nmr.mgh.harvard.edu > To: lys84...@hotmail.com > CC: freesurfer@nmr.mgh.harvard.edu > Subject: Re: [Freesurfer] new subcortical regions > > Hi Lisa > > globus pallidus is included in the aseg, have you looked at it? The > others you could lab on th

Re: [Freesurfer] new subcortical regions

2013-09-05 Thread Bruce Fischl
Hi Lisa globus pallidus is included in the aseg, have you looked at it? The others you could lab on the fsaverage volume and warp to individual subjects if you want, but that won't be as accurate as including them in our atlas (but a lot easier!). We are working on segmenting things like medul

[Freesurfer] new subcortical regions

2013-09-04 Thread Luo,Yishan
Hello, I have run recon-all for my subject, if I want to get more subcortical segmentation, e.g., globus pallidus, medulla, pons and so on, how can I do?Can I manually draw these region on the bert image and transfer them to individual subject, like mri_label2label? Thanks. Lisa