Hi Don
you don't need to convert the dicom series, just point recon-all at ONE
file in the mprage series:
recon-all -i \
-s -sd -all
the list of labels is in $FREESURFER_HOME/FreeSurferColorLUT.txt,
although it contains some labels for structures that we don't routinely
segment (yet!).
I have an MPRAGE dicom file sequences on which I wish to run recon-all .
Here is the command I am using:
mri_convert DICOM_DIRECTORY SubjectName/mri/orig/001.mgz
It returns immediately with the error message:
corRead(): can't open file DICOM_DIRECTORY/COR-.info
Your suggestions would be welc
