Re: [Freesurfer] "orig surface" button

2011-07-28 Thread Bruce Fischl
On Thu, 28 Jul 2011, Antonella Kis wrote: DearĀ  Bruce, In fact, when I run: tkmedit subject2 brainmask.mgz lh.orig lh.white -aux wm.mgz -aux-surface rh.orig rh.white it gave me an error saying that tkmedit does not recognize lh.orig but the green line pops up and the orig surface button is

Re: [Freesurfer] "orig surface" button

2011-07-28 Thread Antonella Kis
DearĀ  Bruce, In fact, when I run: tkmedit subject2 brainmask.mgz lh.orig lh.white -aux wm.mgz -aux-surface rh.orig rh.white it gave me an error saying that tkmedit does not recognize lh.orig but the green line pops up and the orig surface button is now active. Why I still get the error message

Re: [Freesurfer] "orig surface" button

2011-07-28 Thread Allison Stevens
Hi Antonella, When you load the files that those buttons are associated with, then they become active. When you loaded the orig surfaces, the orig surface button still was not active? If you choose any button besides the Navigate button, when you left click, that will move the cursor (red cro

Re: [Freesurfer] "orig surface" button

2011-07-28 Thread Bruce Fischl
Hi Antonella, if it's not active then it probably failed loading the orig surface. Can you send us the output of the tkmedit command? There is a multi-view button you can click in tkmedit to show 3 orthogonal views at the same time. cheers Bruce On Thu, 28 Jul 2011, Antonella Kis wrote:

[Freesurfer] "orig surface" button

2011-07-28 Thread Antonella Kis
Hi Bruce, Thanks again for your valuable information. I was trying to click on my "orig surface" button in the interface but it is not active. Is there a way that I can enable this option/button? I see more buttons are not active. How I can fix this? Second, using tkmedit, how I can see the