On 07/12/2017 05:11 PM, Lu Zhao wrote:
> Dear Douglas,
>
> Thank you for your kind reply and instruction. But I still have a few
> questions:
>
> 1. how can I get the segmentation for BA areas, which have no
> hemisphere bases?
Not so easy because you need to have complete cortical coverage.
Dear Douglas,
Thank you for your kind reply and instruction. But I still have a few questions:
1. how can I get the segmentation for BA areas, which have no hemisphere bases?
2. when the cortical atlas is changed, should the '--wm-annot’ be changed
accordingly? For instance, use '—wm-annot
There are several layers of difficulty here:
1. If you just wanted to use a different cortical segmentation, say,
aparc.a2009s or aparc.DKTatlas, then you can run gtmseg with --ctx-annot
aparc.a2009s 11100 12100 or --ctx-annot aparc.DKTatlas 1000 2000. The
numbers are the base numbers in
Dear freesurfer support,
I am using the PetSurfer to process our PET data. But by default, it would only
generate stats for the segmentation with the aparc atlas.
However, I want to obtain the stats for different freesurfer atlases, like in
the freesurfer outputs (aseg,stats,
Dear freesurfer support,
I am using the PetSurfer to process our PET data. But by default, it would only
generate stats for the segmentation with the aparc atlas.
However, I want to obtain the stats for different freesurfer atlases, like in
the freesurfer outputs (aseg,stats,
