Hi Scott,
You can do trac-all -prep first, to make sure you generate all the files
needed for path reconstruction (including generating priors and masks from
freesurfer recons), then move all your bedpostx files to the dmri.bedpostX
as Anastasia mentioned and then do trac-all -path (for tract
reco
Hi Scott - The bedpost outputs are expected to in a directory called
dmri.bedpostX under the subject's trac-all output directory. You can put
all your bedpost outputs there and proceed at your own risk!
There's a description of other trac-all outputs from the steps before
bedpost here:
http://
Hello,
If I already ran bedpostx on my diffusion data, how can I skip this step in
tracula and still get it to run smoothly.
Thank you,
Scott
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