Re: [Freesurfer] process dying during longitudinal reconstruction

2009-10-15 Thread Dana W. Moore
When I try to redo it, it does the exact same thing. And the same thing is happening with a different subject as well. At 06:43 PM 10/14/2009, Nick Schmansky wrote: >What happens if you restart it? The log terminates in an odd place that >I've never seen before. > >Nick > >On Wed, 2009-10-14 at

Re: [Freesurfer] process dying during longitudinal reconstruction

2009-10-15 Thread Martin Reuter
Hi Dana, never seen this either. Have you tried rerunning the longitudinal of that time point? Might be just a hickup. If it fails again at the same location, we probably need the data. I think the base-data and the cross sectional TP3 should be sufficient for us to replicate this. Best, Martin

Re: [Freesurfer] process dying during longitudinal reconstruction

2009-10-14 Thread Nick Schmansky
What happens if you restart it? The log terminates in an odd place that I've never seen before. Nick On Wed, 2009-10-14 at 22:36 +, Dana W. Moore wrote: > Hi everyone, > > I am trying to run the longitudinal stream on some images. I have 3 > timepoints, and 2 of them finished the stream ju

[Freesurfer] process dying during longitudinal reconstruction

2009-10-14 Thread Dana W. Moore
Hi everyone, I am trying to run the longitudinal stream on some images.  I have 3 timepoints, and 2 of them finished the stream just fine, but a third quits during autorecon1 during the 3rd and final longitudinal step.  There is no error message or anything, it just stops.  The log file is atta