Re: [Freesurfer] recon-all -all error end abruptly

Dear Bruce, I am using 16 GB RAM. Should I increase RAM OR upgrade my graphic card? Thanks Ramesh On Tuesday, June 6, 2017, Bruce Fischl wrote: > Hi Ramesh > > just the same one as before - you ran out of memory, likely because > something else was running at the same time > > cheers > Bruce >

Re: [Freesurfer] recon-all -all error end abruptly

Hi Ramesh just the same one as before - you ran out of memory, likely because something else was running at the same time cheers Bruce On Tue, 6 Jun 2017, Ramesh Babu wrote: Dear Bruce, Today I ran the image processing on the same image which was stopped abruptly earlier. Now it is finish

Re: [Freesurfer] recon-all -all error end abruptly

Sure. I will start now. Tomorrow I will send the report. Thanks Ramesh On Mon, Jun 5, 2017 at 8:26 PM, Bruce Fischl wrote: > Hi Ramesh > > we don't do any automatic updating. Can you try running one of them again > with nothing else running and see if it completes? > > > cheers > Bruce > On Mon

Re: [Freesurfer] recon-all -all error end abruptly

Hi Ramesh we don't do any automatic updating. Can you try running one of them again with nothing else running and see if it completes? cheers Bruce On Mon, 5 Jun 2017, Ramesh Babu wrote: Dear Bruce, Please see the attached file which was completed normally. Earlier I have done this with 6

Re: [Freesurfer] recon-all -all error end abruptly

Hi Ramesh the error log has a line where the GPU says it ran out of memory. Possibly other things were running? cheers Bruce On Mon, 5 Jun 2017, Ramesh Babu wrote: Dear Bruce, Two days back I ran 6 image processing simultaneous in different terminal. Everything finished without any error and

Re: [Freesurfer] recon-all -all error end abruptly

Dear Bruce, Two days back I ran 6 image processing simultaneous in different terminal. Everything finished without any error and took 8.2 hrs (4.5 hrs if I use only one terminal). But yesterday this problem has happened for the first time. I am using Intel® Core™ i7-4790 CPU @ 3.60GHz × 8 process

Re: [Freesurfer] recon-all -all error end abruptly

it looks like you are trying to run the cuda version but your GPU doesn't have enough memory cheers Bruce On Mon, 5 Jun 2017, Ramesh Babu wrote: > Dear Expert, > > recon-all -all process for one subject end abruptly. I have attached the > error report file. Please provide me some solution. > >

[Freesurfer] recon-all -all error end abruptly

Dear Expert, recon-all -all process for one subject end abruptly. I have attached the error report file. Please provide me some solution. Thanks Ramesh Sun Jun 4 21:09:32 IST 2017 /mnt/research/freesurfer_analysis/subjects/grp127 /usr/local/freesurfer/bin/recon-all -all -i grp127_t1.nii -s grp1