Re: [Freesurfer] recon-all cannot execute: required file not found

External Email - Use Caution I don’t see what FREESURFER _HOME is set to, but if you used the .deb package installer, it would be /usr/local/freesurfer/7.4.0, i.e. $ wget

Re: [Freesurfer] recon-all cannot execute: required file not found

er support list Subject: Re: [Freesurfer] recon-all cannot execute: required file not found I’m wondering how you ran recon-all. Do you see the error even running it w/o any arguments? From: freesurfer-boun...@nmr.mgh.harvard.edu On Behalf Of Peled, Noam,PhD Sent: Friday, January 19, 20

Re: [Freesurfer] recon-all cannot execute: required file not found

e6e) After sourcing Freesurfer, recon-all gives following error: .../freesurfer/bin/recon-all: cannot execute: required file not found Other functions, e.g. freeview, mri_info, all seem to work as expected Would love some help. Thanks, Noam

Re: [Freesurfer] recon-all cannot execute: required file not found

, 2024 2:54 PM To: Freesurfer support list Subject: Re: [Freesurfer] recon-all cannot execute: required file not found After sourcing Freesurfer, $FREESURFER_HOME is added to the front of your $PATH. 1. ‘ls -l $FREESURFER_HOME/bin/recon-all’ to check if your recon-all has the execute permissions

Re: [Freesurfer] recon-all cannot execute: required file not found

...@nmr.mgh.harvard.edu On Behalf Of Peled, Noam,PhD Sent: Friday, January 19, 2024 2:42 PM To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] recon-all cannot execute: required file not found Dear group, I'm trying to run Freesurfer on digitalOcean server running Ubuntu 22.10 (GNU/Linux 5.19.0

[Freesurfer] recon-all cannot execute: required file not found

-all: cannot execute: required file not found Other functions, e.g. freeview, mri_info, all seem to work as expected Would love some help. Thanks, Noam ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman