Re: [Freesurfer] recon-all error: No such file or directory

2021-02-23 Thread Douglas N. Greve
My guess is that the problem is the spaces in the folder name. Try removing those spaces and see if it works On 2/18/2021 7:29 PM, Eduardo Bergonzoni Junqueira wrote: External Email - Use Caution Running the command in another directory I got another error: (base)

Re: [Freesurfer] recon-all error: No such file or directory

2021-02-18 Thread Eduardo Bergonzoni Junqueira
External Email - Use Caution Running the command in another directory I got another error: (base) eduardo@eduardo-X555UB:/usr/local/freesurfer/subjects$ recon-all -i /home/eduardo/Área\ de\ Trabalho/Grant_Tractography/t1.nii.gz -s Grant_sub -all Traceback (most recent call last):

[Freesurfer] recon-all error: No such file or directory

2021-02-18 Thread Eduardo Bergonzoni Junqueira
External Email - Use Caution Hello FreeSurfer Developers, I'm attempting to preprocesss a t1.nii.gz image in freesurfer with recon-all. I'm following the tutorial for linux in