[Freesurfer] rerunning recon-all

2013-09-11 Thread Luke Bloy
I have a somewhat strange question and hopefully someone can help me out. I have a few hundred subjects that have all been run through recon-all, and have gone through some QA. In some of the cases control points have been added or brain masks have been modified etc, and recon-all has been

[Freesurfer] Rerunning recon-all after editing aseg

2010-12-09 Thread Jennifer Addicks
Hello, I manually edited the aseg.mgz file for one of my participants, I was wondering if someone could tell me how to rerun the recon-all to ensure that these changes are incorporated in future steps and statistics files. Many thanks, Jennifer ___

Re: [Freesurfer] Rerunning recon-all after editing aseg

2010-12-09 Thread Allison Stevens
What version are you using? -- On Thu, 9 Dec 2010, Jennifer Addicks wrote: Hello, I manually edited the aseg.mgz file for one of my participants, I was wondering if someone could tell me how to rerun the recon-all to ensure that these changes are incorporated in future steps and