Hi Jeff,
This wiki page has info on resampling structural data to diffusion space
(3.1.3) and masking (3.1.4).
https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/Diffusion
-Louis
On Mon, 14 Jan 2013, Douglas Greve wrote:
> Hi Jeff, here was my response from a few days ago. Let me know if you
Hi Jeff, here was my response from a few days ago. Let me know if you
need anything else.
doug
On 1/10/13 11:56 PM, Douglas Greve wrote:
Hi Jeff, see if this page answers your question
http://surfer.nmr.mgh.harvard.edu/fswiki/FsAnat-to-NativeAnat
doug
On 1/10/13 6:24 PM, Jeff Eriksen wrote:
Hi Jeff, see if this page answers your question
http://surfer.nmr.mgh.harvard.edu/fswiki/FsAnat-to-NativeAnat
doug
On 1/10/13 6:24 PM, Jeff Eriksen wrote:
I have been asked to use FreeSurfer to create a good brain mask for
use in another analysis stream (DTI and other things). I have chosen
t
I have been asked to use FreeSurfer to create a good brain mask for use in
another analysis stream (DTI and other things). I have chosen to do this by
running recon-all on the structural scan, then taking the (aseg+aparc) and
using FSL to dilate and erode to fill holes. This I binarize and rotat
