tkmedit is crashing when I try to load a particular subject's inner_skull.surf or outer_skull.surf surfaces. These files were created by the MNE software, so my apologies if this question would be better suited to mne_support. If I load from the command line I get the messages below in the terminal, and tkmedit never opens. If I load the T1 without the surface from the command line and then load the surface in the gui, tkmedit quits and I get the same message in the terminal.
[vantz:bem] (nmr-std-env) tkmedit RMSCH018 T1 -surface $SUBJECTS_DIR/RMSCH018/bem/outer_skull.surf Setting subject to RMSCH018 (null): vertex 0 x coordinate nan! Does anyone know what the problem is? Thanks, Jesse bugr info: FREESURFER_HOME: /usr/local/freesurfer/stable4 Build stamp: freesurfer-Linux-centos4_x86_64-stable-v4.3.1b-20090522 RedHat release: CentOS release 5.3 (Final) Kernel info: Linux 2.6.18-128.1.6.el5 x86_64 NMR Center info (/space/freesurfer exists): machine: vantz SUBJECTS_DIR: /space/ventzl/36/users/RespMon12C/subjects PWD: /space/ventzl/36/users/RespMon12C/subjects/RMSCH018/bem ssh vantz setenv SUBJECTS_DIR /space/ventzl/36/users/RespMon12C/subjects cd /space/ventzl/36/users/RespMon12C/subjects/RMSCH018/bem -- Jesse Friedman, B.A. Massachusetts General Hospital Martinos Center, Manoach Lab Psychiatric Neuroimaging 149 13th Street #2613 Charlestown, MA 02129 Phone: (617) 726-1908 Fax: (617) 726-4078 jes...@nmr.mgh.harvard.edu _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
