Hi Antonin,
Thank you for your input. I will give mri_cvs_register a try.
Best,
Corinna
On Mon, Apr 24, 2017 at 10:24 AM, Antonin Skoch wrote:
> Dear Corinna,
>
> I am not sure what is (or whether is) something wrong with your commands,
> but in any case I would be cautious of interpretation
Dear Corinna,
I am not sure what is (or whether is) something wrong with your commands, but
in any case I would be cautious of interpretation of results using such method,
mainly from following reasons:
1.
mni152reg uses 12 DOF whole-brain registration. You cannot expect to get
perfect alignme
You can use mri_segstats passing newoutputfile as the --seg
On 04/19/2017 06:47 PM, Corinna Bauer wrote:
> Dear all,
>
> I have a series of .vtk files in MNI152 1mm space from an external
> thalamus atlas outlining specific thalamic nuclei. I would like to put
> these into native subject space
Dear all,
I have a series of .vtk files in MNI152 1mm space from an external thalamus
atlas outlining specific thalamic nuclei. I would like to put these into
native subject space and calculate the volume from each nuclei.
I would imagine that I would do the following:
1. run mni152reg --s --1 o
