Thanks, Bruce!!
Daniel
On Feb 23, 2015, at 8:23 AM, Bruce Fischl fis...@nmr.mgh.harvard.edu wrote:
Hi Daniel
I wouldn't advise this - you will miss most of the activation unless it
happens to be right next to where the surface runs adjacent to the structure
of interest. For
Hi Daniel
I wouldn't advise this - you will miss most of the activation unless
it happens to be right next to where the surface runs adjacent to the
structure of interest. For subcortical structures you are better off
showing the results in slices.
cheers
Bruce
On Mon, 23
Feb 2015, Yang,
Hi Bruce,
Thanks for the reply. My main question is how to best visualize subcortical
activation in a figure.
Sometimes we do see some subcortical activation (like the attached, which is a
random search) (if the attachment does not work, please see the example here:
Hi Daniel
no, tksurfer visualizes surfaces exclusively, and the subcortical
structures are volumetric by and large. You could tesselate their surface
and view it in tksurfer, or just use tkmediit or freeview.
cheers
Bruce
On Thu, 19 Feb
2015, Yang, Daniel wrote:
Dear FreeSurfer experts,
Hi Bruce,
Thanks! and yes, I used mri_vol2surf to convert subcortical region as a
volume file to surface (mgh file) and then visualize it with tksurfer.
According to what you said, this is still valid, right?
Best,
Daniel
On 2/19/15, 5:59 PM, Bruce Fischl fis...@nmr.mgh.harvard.edu wrote:
Hi
