Hello,
We recently transitioned from a CloudMan instance of galaxy to our own
cluster and started having problems with calls to tools from within
other tools. For example when Tophat calls bowtie-inspect its not
finding the executable. To fix this I listed bowtie in the
requirements section of the
All tools need to be in the path of the user running galaxy.
Regards,
Thon
Thon de Boer, Ph.D
Bioinformatics Guru
T: +1.650.799.6839 | E-mail: thondeb...@me.com
http://www.linkedin.com/pub/thon-de-boer/1/1ba/a5b
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