Re: [galaxy-dev] Galaxy Reports no longer functions

2012-08-20 Thread Hans-Rudolf Hotz
Hi Iry The last but one line: socket.error: [Errno 98] Address already in use holds probably the clue. Looks like something else is running on the same port or you didn't stop the reports server before restarting it (after the upgrade) Regards, Hans On 08/17/2012 11:08 PM, Iry Witham

Re: [galaxy-dev] grouping/separating parameters on the page

2012-08-20 Thread Hans-Rudolf Hotz
On 08/17/2012 06:41 PM, Dan Tenenbaum wrote: Hello, Is there a way to do one or both of the following: 1) Group a set of related parameters together on a tool page For this we use the (unfortunately) deprecated page tag set, see:

Re: [galaxy-dev] egg distribution error when running galaxy-central

2012-08-20 Thread Clare Sloggett
Hi Tomithy, Thanks, this worked for me too! Just to be clear for interested devs: If I run galaxy-dist on my mac it asks me to build a whole series of eggs by hand using scripts/scramble.py, and if I follow these instructions, galaxy runs. A bit tedious but trivial to do. If I run

[galaxy-dev] Backup_strategies_for_Galaxy

2012-08-20 Thread Rodolfo Aramayo
Hi, We are in the process of deploying a small Galaxy server here at Texas AM University I am a GNU/Linux kind of guy My IT people want to use an SMB-mounted drive share as a backup destination I am concerned that this might impact the performance of the server as in my mind the equation is as

Re: [galaxy-dev] Trackster Bug

2012-08-20 Thread Jeremy Goecks
This bug has been fixed in galaxy-central changeset 0b58ac6510c5 Thanks for reporting, J. On Aug 15, 2012, at 5:41 AM, SHAUN WEBB wrote: Hi, not sure if this has been reported yet. If I use the dataset icon to view in trackster then select view in saved visualisation, the saved

Re: [galaxy-dev] FTP upload - symlink to uploaded data

2012-08-20 Thread Nate Coraor
On Aug 17, 2012, at 3:17 AM, Joachim Jacob wrote: Hi Nate, thanks. Do you know what's the reason for using copying first the contents to the /tmp directory, before copying it into a the database/files/... Seems inefficient to do so, or is this not how it works perhaps? Hi Joachim, If