Are you executing `sudo` as the galaxy user, or as the ubuntu user? The
galaxy user is not a sudoer, and you shouldn't need to use sudo for
anything you want to do as the galaxy user. The only use in this
particular case for using `sudo` as root is to switch *to* the galaxy user.
-Dannon
On Wed
Hello,
When I sudo galaxy user at ssh terminal, the password prompted for galaxy. What
is it?
Thanks,
Kathryn
-Original Message-
From: Dannon Baker [mailto:dannonba...@me.com]
Sent: Friday, January 11, 2013 12:12 PM
To: Jennifer Jackson
Cc: Galaxy Dev; Sun, Wenping [USA]
Subject: [Extern
The error is most likely caused by your input data and parameter choices. If
you click the little bug icon in the history for a dataset in the error state,
you'll see the full error output display that will have more information and
will hopefully help you figure out what's going on. One poten
For the output of 1.3.7.1, I didn't check wiggle files since it takes longer
time. So the output are bed and html report, both with the same error and
that's all I have from the right panel below the file names. I already deleted
those errored-outputs.
Thanks,
Kathryn
-Original Message---
1.3.7.1 is definitely the version you want -- the Galaxy wrappers are not yet
compatible with 1.4* versions (so they are guaranteed to fail). Is there more
error output available, or is that it, ending with #tag size?
On Jan 11, 2013, at 4:48 PM, "Sun, Wenping [USA]" wrote:
> I linked the ma
I linked the macs version 1.3.7.1 to the default as the commands below.
It runs, however, still get the error message as below --
MACS on data 65 and data 66 (peaks: bed)
0 bytes
An error occurred running this job: INFO @ Fri, 11 Jan 2013 19:30:50:
# ARGUMENTS LIST:
# name = MACS_in_Galax
