Respected Sir,
I don't think so that problem is in tool, because when I run same tool of
normal terminal, it generate output.
What I am thinking is:
Consider Galaxy is running from its own directory, my files are in
*/home/user/Documents/*
While uploading file, I am choosing for "Link to files w
On Thu, Feb 27, 2014 at 4:20 PM, do kadya wrote:
>
> I don't think so that problem is in tool, because when I run same tool of
> normal terminal, it generate output.
This is why I was asking about Perl environment variables - they may be
different compared to when you run the tool. For example, i
On Thu, Feb 27, 2014 at 9:32 AM, do kadya wrote:
> Hi,
> Thank You for your kind reply.
>
> I am having problem in running command in Galaxy.
> my current command:
>
>
>
>
> /usr/bin/x_tool fileList.tab file1.bam file2.bam
>
> I have created xml file so that i can run this command thr
