Hi Jeremy,
Thanks for pointing it out. It was indeed an extra line at end of file that
caused the problem. It works fine now.
I think for organism not found in UCSC, best solution is to upload the
genome fasta file and go for edit attributes -> convert FASTA to 2bit and
len file .
Thanks
RT
(Moved to galaxy-dev mailing list because it concerns server admin rather than
Galaxy usage.)
If everything worked fine with a human build but not for PF3d7, then my guess
is that the len file for PF3d7 isn’t correctly formatted. Right now, the file
parser is very unforgiving—no extra spaces or
