Re: [galaxy-dev] Urgent help needed

2011-12-06 Thread Dannon Baker
ou, > > From: Dannon Baker [dannonba...@me.com] > Sent: Monday, December 05, 2011 2:41 PM > To: Toqa Manasrah > Subject: Re: [galaxy-dev] Urgent help needed > > Sure. See the link in my previous email > (http://wiki.g2.bx.psu.edu/Admin/T

Re: [galaxy-dev] Urgent help needed

2011-12-05 Thread Toqa Manasrah
nifer Jackson; galaxy-user > Subject: Re: [galaxy-dev] Urgent help needed > > Toqa, > > Just to make sure I've understood your question: the problem is that a tool > that you're trying to wrap doesn't provide a way to specify a particular > output filename? Tak

Re: [galaxy-dev] Urgent help needed

2011-12-05 Thread Dannon Baker
Toqa, Just to make sure I've understood your question: the problem is that a tool that you're trying to wrap doesn't provide a way to specify a particular output filename? Take a look at the from_work_dir attribute of a element. Or are you asking how to define outputs in general? For that, s

[galaxy-dev] Urgent help needed

2011-12-05 Thread Toqa Manasrah
Hi Everybody, I am running a tool which is not defining the output file name as parameter. the tool is running and I can see the output file in the history directory but not in the history frame. how could I solve the problem? I should see and download the output file from the history but I see