Re: [galaxy-dev] Database configuration

2011-10-24 Thread Nate Coraor
Luciano Cosme wrote: > Thanks Greg, >I created the database instance and set the path at universe_wsgi.ini. > Then when I run sh run.sh I get the following error message: > > > root@aedes:/home/koala2/galaxy-dist# sh run.sh > python path is: > /home/koala2/galaxy-dist/eggs/numpy-1.6.0-py2.7-l

Re: [galaxy-dev] Database configuration

2011-10-21 Thread Luciano Cosme
Thanks Greg, I created the database instance and set the path at universe_wsgi.ini. Then when I run sh run.sh I get the following error message: root@aedes:/home/koala2/galaxy-dist# sh run.sh python path is: /home/koala2/galaxy-dist/eggs/numpy-1.6.0-py2.7-linux-x86_64-ucs4.egg, /home/koala2/ga

Re: [galaxy-dev] Database configuration

2011-10-21 Thread Greg Von Kuster
It looks like you don't have you postgres database set up correctly to accept communication. Check the postgres documentation. On Oct 21, 2011, at 1:54 AM, Luciano Cosme wrote: > Thanks Greg, >I created the database instance and set the path at universe_wsgi.ini. > Then when I run sh run.s

Re: [galaxy-dev] Database configuration

2011-10-20 Thread Greg Von Kuster
Luciano, You only need to create the database instance itself, you do not need to manually create any tables. When you have created the database instance, configure the path to it using the database_connection setting in universe_wsgi.ini, something like: database_connection = postgres:///gal

[galaxy-dev] Database configuration

2011-10-20 Thread Luciano Cosme
Hi, I am sorry about the trivial questions. I am following this guide http://wiki.g2.bx.psu.edu/Admin/Config/Upload%20via%20FTP to set up a ftp server to upload data to my local instance of galaxy. I am getting a error when I am configuring the database server: postgres@aedes:~$ createuser -SDR