The paster script distributed with Galaxy is a stripped down Galaxy
specific version. It only supports the command serve and the arguments
--daemon or --reload.
--
James Taylor, Associate Professor, Biology/CS, Emory University
On Fri, Oct 11, 2013 at 8:36 AM, Renato Alves
@lists.bx.psu.edu
Date:02/10/2012 10:50 AM
Subject:Re: [galaxy-dev] Error when running cleanup_datasets.py
On Oct 2, 2012, at 10:44 AM, Liisa Koski wrote:
Hi Nate,
That select statement does not return anything :(
Could you add a bit of debugging to the script to see
That did it! Thanks Nate!
From: Nate Coraor n...@bx.psu.edu
To: Liisa Koski liisa.ko...@basf.com
Cc: galaxy-dev@lists.bx.psu.edu
Date: 12/11/2012 12:13 PM
Subject:Re: [galaxy-dev] Error when running cleanup_datasets.py
On Nov 8, 2012, at 8:55 PM, Liisa Koski wrote:
Hi
Hello,
I am trying to run the cleanup scripts on my local installation but get
stuck when trying to run the following:
./scripts/cleanup_datasets/cleanup_datasets.py universe_wsgi.ini -d 10 -5
-r
Deleting library dataset id 7225
Traceback (most recent call last):
File
It seems like GATK authors at Broad really really want you to phone
home every time you use their software. I'm getting this error while
running the lastest version:
ERROR MESSAGE: Running with the -et NO_ET or -et STDOUT option
requires a GATK Key file. Please see
Hi When running the run_unit_tests.sh script on my server i get the
following Error. Wondering what It means and whether It is something I
have done or something within galaxy
#Start Error
Doctest: galaxy.web.form_builder.TextArea ... ok
TextField (galaxy.web.form_builder)
Doctest:
Dayananda,
The tool data directory should have been created upon running galaxy the first
time. Does galaxy user have write access to this filesystem? The first thing
to check would be to inspect the galaxy directory and see what's actually
there. Does '
Hello,
My name is Dayananda Sagar Gangadharaiah and I am a computational
biology research associate at the University of Nebraska, Lincoln.
We have been trying to install Galaxy for running a software tool called
KIRMES. We are encountering the following errors when we run Galaxy using sh
