Re: [galaxy-dev] Error when running cleanup_datasets.py

2012-11-12 Thread Liisa Koski
That did it! Thanks Nate! From: Nate Coraor To: Liisa Koski Cc: galaxy-dev@lists.bx.psu.edu Date: 12/11/2012 12:13 PM Subject:Re: [galaxy-dev] Error when running cleanup_datasets.py On Nov 8, 2012, at 8:55 PM, Liisa Koski wrote: > Hi Nate, > I'm back t

Re: [galaxy-dev] Error when running cleanup_datasets.py

2012-11-12 Thread Nate Coraor
robably to orphan the broken library dataset, e.g.: update library_dataset set folder_id = null where id=7225; --nate > > Thanks in advance for your help, > Liisa > > > > > > From:Nate Coraor > To:Liisa Koski > Cc:galaxy-d

Re: [galaxy-dev] Error when running cleanup_datasets.py

2012-11-08 Thread Liisa Koski
t; > > > From: Nate Coraor > To:Liisa Koski > Cc:galaxy-dev@lists.bx.psu.edu > Date:01/10/2012 01:01 PM > Subject:Re: [galaxy-dev] Error when running cleanup_datasets.py > > > > On Sep 24, 2012, at 10:41 AM, Liisa Kosk

Re: [galaxy-dev] Error when running cleanup_datasets.py

2012-10-02 Thread Liisa Koski
Hi Nate, That select statement does not return anything :( Thanks, Liisa From: Nate Coraor To: Liisa Koski Cc: galaxy-dev@lists.bx.psu.edu Date: 01/10/2012 01:01 PM Subject:Re: [galaxy-dev] Error when running cleanup_datasets.py On Sep 24, 2012, at 10:41 AM, Liisa

Re: [galaxy-dev] Error when running cleanup_datasets.py

2012-10-01 Thread Nate Coraor
On Sep 24, 2012, at 10:41 AM, Liisa Koski wrote: > Hello, > I am trying to run the cleanup scripts on my local installation but get stuck > when trying to run the following: > > ./scripts/cleanup_datasets/cleanup_datasets.py universe_wsgi.ini -d 10 -5 -r > > Deleting library dataset id 7225

[galaxy-dev] Error when running cleanup_datasets.py

2012-09-24 Thread Liisa Koski
Hello, I am trying to run the cleanup scripts on my local installation but get stuck when trying to run the following: ./scripts/cleanup_datasets/cleanup_datasets.py universe_wsgi.ini -d 10 -5 -r Deleting library dataset id 7225 Traceback (most recent call last): File "./scripts/cleanup_data