Hello Dmitry,
Sorry the delayed response. It occurs to me that data source tools may
be an alternative I should have pointed you to right away -
https://wiki.galaxyproject.org/Admin/Internals/DataSources. I am not
sure they are a perfect fit but regular tools are not a perfect fit
either.
On
Hello John,
Thank you very much for the very extended response.
It seems I have enough reading to be calm for a month :-).
Thank you again,
Dmitry
On 5/19/2014 4:42 PM, John Chilton wrote:
Hello Dmitry,
Sorry the delayed response. It occurs to me that data source tools may
be an alternative
Hello John,
If it is at all possible to send the data to the web service instead ...
Unfortunately, I cannot push the data to the web service, because this
is the BES one and the interface is defined in the spec.
As far as I understand reading the mailing list there is no way to pull
data
Hello Dmitry,
This use case isn't really addressed by Galaxy currently.
There is not a generic way of doing grabbing the users credentials
like this or producing URLs from inside the tool. This depends on a
lot of different things - how Galaxy's proxy is configured, etc... so
in many (all?)
Hello,
Is there any way to provide a protected resource link to the external
application?
My tool is supposed to call a Web service via SSL which should access to
the Galaxy resources.
In ideal it would be something like
ftp://user:passw...@mygalaxy.net/fasta.gz
The Web service then
