[galaxy-dev] Sysadmin Question

2013-12-19 Thread Shrum, Donald C
Hi, I'm at the Florida State University HPC and setting up an a Galaxy server that will be used to submit jobs to our HPC cluster. I'm using apache as a proxy for the Galaxy server and I'm in the process of setting up ldap authentication. I had planned to mount our HPC file system (with

Re: [galaxy-dev] Sysadmin Question

2013-12-19 Thread Nate Coraor
Hi Donny, Galaxy expects data to be copied in to its data store (by default, galaxy-dist/database/files/), and it's not designed to access data in the way you're suggesting. However, there are some workarounds. First, if the data is added to a Data Library (an admin feature, although once a