Re: [galaxy-dev] Toolshed : tool_dependency xml, action problem

2014-07-17 Thread Greg Von Kuster
>>>> >>>> Iyad Kandalaft >>>> Microbial Biodiversity Bioinformatics >>>> Agriculture and Agri-Food Canada | Agriculture et Agroalimentaire Canada >>>> 960 Carling Ave.| 960 Ave. Carling >>>> Ottawa, ON| Ottawa (ON) K1A 0C6 >>>> E-mail

Re: [galaxy-dev] Toolshed : tool_dependency xml, action problem

2014-07-17 Thread Nicolas Lapalu
ev-boun...@lists.bx.psu.edu] On Behalf Of Nicolas Lapalu Sent: Monday, July 07, 2014 5:57 AM To: galaxy-dev@lists.bx.psu.edu Subject: [galaxy-dev] Toolshed : tool_dependency xml, action problem Hi all, I'm trying to package my tool wrapper to release it in the ToolShed. I need to download t

Re: [galaxy-dev] Toolshed : tool_dependency xml, action problem

2014-07-15 Thread Greg Von Kuster
lephone | Téléphone 613-759-1228 >> Facsimile | Télécopieur 613-759-1701 >> Teletypewriter | Téléimprimeur 613-773-2600 >> Government of Canada | Gouvernement du Canada >> >> >> >> -Original Message- >> From: galaxy-dev-boun...@lists.bx.psu.edu &

Re: [galaxy-dev] Toolshed : tool_dependency xml, action problem

2014-07-07 Thread Nicolas Lapalu
nal Message- From: galaxy-dev-boun...@lists.bx.psu.edu [mailto:galaxy-dev-boun...@lists.bx.psu.edu] On Behalf Of Nicolas Lapalu Sent: Monday, July 07, 2014 5:57 AM To: galaxy-dev@lists.bx.psu.edu Subject: [galaxy-dev] Toolshed : tool_dependency xml, action problem Hi all, I'm trying to p

Re: [galaxy-dev] Toolshed : tool_dependency xml, action problem

2014-07-07 Thread Kandalaft, Iyad
essage- From: galaxy-dev-boun...@lists.bx.psu.edu [mailto:galaxy-dev-boun...@lists.bx.psu.edu] On Behalf Of Nicolas Lapalu Sent: Monday, July 07, 2014 5:57 AM To: galaxy-dev@lists.bx.psu.edu Subject: [galaxy-dev] Toolshed : tool_dependency xml, action problem Hi all, I'm trying to package my tool wrapper

[galaxy-dev] Toolshed : tool_dependency xml, action problem

2014-07-07 Thread Nicolas Lapalu
Hi all, I'm trying to package my tool wrapper to release it in the ToolShed. I need to download the associated binary file and change the permissions. I wrote a tool_dependency xml file with a downlod_binary and chmod actions. My tool_dependency_dir is well defined in my universe file. The down