Thanks for the reply! I'll try that one. I'll come back if the problem
still persists.
Cheers,
CL
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On Apr 29, 2012, at 9:19 PM, Ciara Ledero wrote:
This is my code for running a samtools command internally, via Galaxy:
open INP, $ARGV[0]
or die Cannot open file: $!;
$file = $ARGV[1];
open OUT, $file
or die Cannot open file: $!;
@out =
On Apr 29, 2012, at 9:19 PM, Ciara Ledero wrote:
This is my code for running a samtools command internally, via Galaxy:
open INP, $ARGV[0]
or die Cannot open file: $!;
$file = $ARGV[1];
open OUT, $file
or die Cannot open file: $!;
@out =
This is my code for running a samtools command internally, via Galaxy:
open INP, $ARGV[0]
or die Cannot open file: $!;
$file = $ARGV[1];
open OUT, $file
or die Cannot open file: $!;
@out = `/home/applications/samtools-0.1.7a/samtools view -bS $ARGV[0] 21`;
print OUT @out;
