Re: [galaxy-dev] documentation

2014-02-27 Thread Shrum, Donald C
Shrum, Donald C; galaxy-dev@lists.bx.psu.edu Subject: Re: [galaxy-dev] documentation Hi Donny, it should be mentioned in the Tool Shed wiki, for example here: https://wiki.galaxyproject.org/InstallingRepositoriesToGalaxy If you think the wiki is not sufficient, please add it to the wiki. Where d

Re: [galaxy-dev] documentation

2014-02-27 Thread Björn Grüning
Hi Donny, it should be mentioned in the Tool Shed wiki, for example here: https://wiki.galaxyproject.org/InstallingRepositoriesToGalaxy If you think the wiki is not sufficient, please add it to the wiki. Where do you think that information is needed and missing? Cheers, Bjoern Am 27.02.2014

[galaxy-dev] documentation

2014-02-27 Thread Shrum, Donald C
I'm new to galaxy and I discovered during the install process... That I needed a folder named ../shed_tools that is writable by galaxy. migrated_tools_conf.xml: shed_tool_conf.xml: I spend a good chuck of time as a new user figuring this out so it's probably worth adding to the docs if it's no

[galaxy-dev] Documentation for Galaxy's tool dependency environment system

2012-01-23 Thread Nate Coraor
Hi all, Galaxy has had a tool dependency management system for quite a while now, but it was never documented in the past. I have just written this documentation: http://wiki.g2.bx.psu.edu/Admin/Config/Tool%20Dependencies The system does not automatically install anything for you (this is