Re: [galaxy-dev] Installing Cairo into Gakaxy

2015-08-26 Thread Björn Grüning
Hi Christian, looking at the R package and on the Docker build instructions, R seems to be installed with cairo support: https://github.com/galaxyproject/tools-iuc/blob/master/packages/package_r_3_2_1/tool_dependencies.xml https://github.com/natefoo/docker-build/blob/master/R/build.sh Are you us

Re: [galaxy-dev] Get dataset/API ids for a dataset

2015-08-26 Thread Carl Eberhard
Hi, Asma Sorry for the confusion. You may want to have a look here: http://docs.makotemplates.org/en/latest/index.html Mako is a python templating language. No tag is required to run python in it (when the server is building the page). Simply use the brackets: <% # executes python code while

Re: [galaxy-dev] Installing Cairo into Gakaxy

2015-08-26 Thread Christian Brenninkmeijer
Still looking for an example tool_dependencies.xml to install R Cairo package Farther update. package_cairo_1_12_14 needs to be at the same level as package_r_3_1_2 inside of setup_r_environment without the set_environment_for_install I am no longer getting cairo.h No but am still getting ch

[galaxy-dev] Installing Cairo into Gakaxy

2015-08-26 Thread Christian Brenninkmeijer
Hi All, Has anyone got a working example tool_dependencies.xml to install the Cairo package into R. (I actually need a package that depends on R Cairo but the current issue is Cairo) I am having the cairo.h not found issue I have cloned https://toolshed.g2.bx.psu.edu/view/devteam/package_cairo