[galaxy-dev] Problem with load balancing.

2015-09-18 Thread Zuzanna K. Filutowska
Dear All, I am trying to run galaxy in multiple processes. I followed the documentation: https://wiki.galaxyproject.org/Admin/Config/Performance/Scaling And while the python processes seem to run fine, the balacing is broken - while accessing Galaxy server via www, I can only download a text

Re: [galaxy-dev] Error when Installing package_galaxy_utils_1_0

2015-09-18 Thread Sven E. Templer
Dear Leslie, I solved the problem by using a new python installation (we use the module system to define PATH, PYTHONPATH, PYTHONUSERBASE and PYTHONHOME), without any site libraries installed. Before in the installation I had those packages (in /software/Python/2.7.9/lib/python2.7/site-packages/)

[galaxy-dev] Question about using dynamic options and refresh_on_change for rendering 2 associated select lists

2015-09-18 Thread Greg Von Kuster
Hello all, I’m working on adding support to the Galaxy framework for datatypes in the constructive solid geometry (CSG) space and I have several working Galaxy tools and a visualization plugin that deal with 3d shapes in this environment. All of this work will soon be contributed to open

Re: [galaxy-dev] Question about using dynamic options and refresh_on_change for rendering 2 associated select lists

2015-09-18 Thread Greg Von Kuster
Hi Sam, Thanks for the pointer to the Trello card. I noticed the card is kind of old (I think it predates data tables), so I just wanted to confirm the approach. For my tool, should I use the existing from_file option for dynamic options (call the file test_select_options.txt”) with the file

Re: [galaxy-dev] Question about using dynamic options and refresh_on_change for rendering 2 associated select lists

2015-09-18 Thread Greg Von Kuster
Hi Sam, I have another related question that I’m hoping you can help with. In my case, the dataset contains the information I need as the contents of the test_select_options.txt file, so that file is not static. The values that are needed to provide the options in my select list 2 would have

Re: [galaxy-dev] Question about using dynamic options and refresh_on_change for rendering 2 associated select lists

2015-09-18 Thread Aysam Guerler
Hi Greg, The tool form supports multiple dynamic fields which depend on each other. You may want to take a look at this: https://trello.com/c/NOmjJxCi/428-305-potential-bug-in-dynamic-options-filters . Hope this helps, Sam On Fri, Sep 18, 2015 at 8:30 AM, Greg Von Kuster

Re: [galaxy-dev] Question about using dynamic options and refresh_on_change for rendering 2 associated select lists

2015-09-18 Thread Aysam Guerler
Hi Greg, I am not sure which data source would be the most suitable for your use case (maybe someone else can help here) but either should work and refresh properly if filtered properly. Thanks, Sam On Fri, Sep 18, 2015 at 11:02 AM, Greg Von Kuster wrote: > Hi Sam, > > I have