[galaxy-dev] Galaxy Startup Failing

2015-11-01 Thread Keith Suderman
Greetings, I am trying to upgrade our Galaxy instance to the latest stable code from master and now our instance won't start using my /etc/init.d/galaxy script. That is: > sudo service galaxy start no longer works. It says it does (i.e. prints "[OK]"), but Galaxy isn't running and nothing is

[galaxy-dev] Tool code for symlinking a data collection from input to output?

2015-11-01 Thread Dooley, Damion
Has anyone done a tool part of which simply takes in a data collection and provides it (symlinked) in a corresponding output data collection? We have a quality control tool that enables us to stop workflow, preventing subsequent jobs to be run if a problem has been detected. Currently our tool