[galaxy-dev] No handlers could be found for logger "galaxy.config"

2015-12-11 Thread Langhorst, Brad
Hi: When I run set_user_disk_usage.py I get that message … Has something changed about logging? I don’t see anything in the python script that looks like “galaxy.config” related to a logging setup. Brad — Brad Langhorst, Ph.D. Development Scientist New England Biolabs ___

Re: [galaxy-dev] Pass Working Directory from xml

2015-12-11 Thread Daniel Blankenberg
Hi Todd, Can you just pass in “.”? the_tool.py -o ‘.' Thanks for using Galaxy, Dan On Dec 11, 2015, at 4:00 PM, Todd Oakley wrote: > Greetings, >I feel this must be simple, but I cannot find it. > > I'm making a wrapper for a tool that requires the output directory to be > specif

[galaxy-dev] Pass Working Directory from xml

2015-12-11 Thread Todd Oakley
Greetings, I feel this must be simple, but I cannot find it. I'm making a wrapper for a tool that requires the output directory to be specified on the command line of a python script (otherwise it uses the path of the input file for the multiple output files). How can I pass the working di