Re: [galaxy-dev] Galaxy on the Cloud with Openstack

2016-11-17 Thread Enis Afgan
When you cloned the playbook repo, did you do it recursively so any dependent roles get installed? For example, in my local copy, I have the following value in roles/galaxyprojectdotorg.cloudman-image/meta/main.yml (under dependencies): - { role: smola.java, java_packages: 'oracle-java8-installer'

Re: [galaxy-dev] Using pbs-python with glibc version 2.12

2016-11-17 Thread Nate Coraor
Hi David, It sounds like you may have installed the version of pbs-python currently in PyPI, which includes a copy of the Torque C library that is not "manylinux"-safe (it is not backwards compatible to older systems). The solution here is to install pbs-python from its source distribution: 1. Ac

[galaxy-dev] Using pbs-python with glibc version 2.12

2016-11-17 Thread David Lee
Hi, I'm trying to install Galaxy version 16.07 on a cluster with the PBS job scheduler that is using glibc version 2.12. The following error message suggests that pbs-python needs at least glibc version 2.14 - assert pbs is not None, PBS_IMPORT_MESSAGE AssertionError: The Python pbs-pytho