Re: [galaxy-dev] tmp file under database/tmp get regenerated after restarting Galaxy

2016-12-20 Thread Mark Xiao
Hi, Just want to follow up this request. We hope to have some tips about how to investigate this problem. Because of this issue, we cannot restart Galaxy when there are running jobs. Thanks, Mark 2016-11-15 16:52 GMT-06:00 Mark Xiao : > Dear Galaxy Developers, > > I am using Galaxy version 15.1

Re: [galaxy-dev] Tools pick up Python modules from Galaxy core rather than installed tool dependencies

2016-12-20 Thread Peter Briggs
Hello Nate Thanks for the follow up, and the tip off about manipulating the env variables in job_conf.xml for specific job destinations - I didn't know about that but I could imagine other situations where it might be useful! Best wishes Peter -- Peter Briggs peter.bri...@manchester.ac.uk Bio

Re: [galaxy-dev] Connection to mariaDB generates tables, but does not migrate information

2016-12-20 Thread Hans-Rudolf Hotz
Hi Evan Although, this is a MySQL to PostgreSQL migration, you might find some ideas and tricks for you case as well: https://wiki.galaxyproject.org/Community/Log/2015/MySQL2PostgreSQL Regards, Hans-Rudolf On 12/19/2016 06:46 PM, Nate Coraor wrote: Hi Evan, Migration only refers to the s